• Department of Computer Science and Biomedical Informatics of the University of Thessaly

• Faculty of Biology, National and Kapodistrian University of Athens, MSc in Bioinformatics
• Dept. of Informatics and Telecommunications, National and Kapodistrian University of Athens, MSc in Information Technologies in Medicine and Biology
• School of Medicine, University of Patras, MSc in Informatics for Life Sciences
• Department of Biotechnology, Agricultural university of Athens, MSc in Systems Biology
• Medical School, University of Thessaly, MSc in Biomedical Research Methodology, Biostatistics and Clinical Bioinformatics
• Department of Computer Science and Biomedical Informatics, University of Thessaly, MSc in Informatics and Computational Biomedicine

Bioinformatics-Related Greek Universities

• Aristotle University of Thessaloniki
• Agricultural University of Athens
• Democritus University of Thrace
• National & Kapodistrian University of Athens
• National Technical University of Athens
• Ionian University
• Athens University of Economics and Business
• University of the Aegean
• University of Thessaly
• University of Ioannina
• University of Crete
• University of Macedonia
• University of Patras
• University of Piraeus
• Technical University of Crete
• Harokopio University of Athens